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Support #1238

Genotyping Data - plink format

Added by Dionysios Grigoriadis about 1 year ago. Updated about 1 year ago.

Status:
Resolved
Priority:
Normal
Category:
Biomarkers and Genetics
Target version:
-
Start date:
09/05/2019
Due date:
% Done:

100%

Estimated time:

Description

Hi,

We have granted access to the gwas data through EGA (through WTSI) after the process of signing an agreement (dataset EGAD00010000890). However, the data-set we granted access to contains illumina's IDATS files with the signal intensities making it time-consuming to process them. Is there anyway we can get this data in plink format?

Thanks a lot,
Dionysios Grigoriadis
Bioinformatician
St. George's University of London

History

#1 Updated by Stephanie Auty about 1 year ago

  • Private changed from Yes to No
  • % Done changed from 0 to 10
  • Status changed from New to In Progress

The Understanding Society team is looking into it and we will get back to you as soon as we can.

Best wishes,
Understanding Society User Support Team

#2 Updated by Stephanie Auty about 1 year ago

  • % Done changed from 10 to 90
  • Assignee changed from Stephanie Auty to Dionysios Grigoriadis
  • Status changed from In Progress to Feedback

Dear Dionysios,

We do not support these files here. Please write to the EGA about this.

Best wishes,
Stephanie

#3 Updated by Gundi Knies about 1 year ago

  • % Done changed from 90 to 100
  • Status changed from Feedback to Resolved

Also available in: Atom PDF